BIO 227 Principles of Microbiology with Laboratory
5 Credits
Description:
Introduction to fundamental microbiological principles and techniques emphasizing structural, functional, ecological, and evolutionary relationships among microorganisms. Includes laboratory exercises in general microbiology.
Integrated components: Lecture: 3 credits (45 contact hours). Laboratory: 2 credits (60 contact hours)
Pre-requisites:
BIO 112 or consent of instructor
Competencies:
Upon completion of this course, the student can:
1. Use terminology associated with the study of microorganisms including bacteria, viruses, fungi, protozoans, algae, and helminths.
2. Demonstrate understanding of basic chemistry associated with the functions and metabolic activities of microorganisms.
3. Demonstrate understanding of factors affecting the growth of microorganisms.
4. Demonstrate understanding of principles regarding DNA, protein synthesis, and genetics of bacteria and viruses and principles of genetic technology (gene splicing and biotechnology).
5. Classify organisms using the characteristics of each major group.
6. Associate a specific microorganism with a specific disease.
7. Demonstrate understanding of specific and nonspecific defenses of the body to microorganism infection and the major antimicrobial drug types.
8. Demonstrate understanding of the role of microorganisms in food production, chemical production, agriculture, and seage treatment.
9. Demonstrate understanding of the effects of microorganisms on lifestyles, health, environment, industry, and the economy.
10. Demonstrate understanding of the role of selected microorganisms as agents of biological warfare.
11. Make observations, record data, and critically evaluate information for accuracy, relevance, and importance.
12. Form conclusions from data collected.
13. Demonstrate proper microscopy, culture, and aseptic techniques.
14. Properly dispose of bacterial cultures.
15. Determine the identity of unknown bacteria.
16. Identify microorganisms including fungi, algae, protozoans, and helminths.
Outline:
I. The microbial world—an introduction
A. Microbes in ordinary life
B. History of microbiology
C. Diversity of microorganisms
II. Basic chemistry
A. Atoms and molecules
B. Chemical properties of water
C. Inorganic chemistry
D. Organic chemistry
E. Enzymes
III. Microscopy and staining
A. The light microscope
B. Other types of microscopes
C. Basic and special staining techniques
IV. Structure and function of the prokaryotic cell
A. Size, arrangement, shapes
B. Structures external to the cell wall
C. Structures internal to the cell wall
D. Differences between prokaryotic and eukaryotic cells
V. Metabolism
A. Catabolic and anabolic reactions
B. Enzymes
C. Oxidation and reduction reactions
D. Carbohydrate catabolism
E. Lipid catabolism
F. Protein catabolism
VI. Microbial growth and media
A. Physical and chemical requirements for growth
B. Bacteriological media and culture techniques
C. Methods of measuring microbial growth
VII. Control of microbial growth
A. Conditions influencing microbial growth
B. Actions of microbial control agents
C. Physical methods of microbial control
D. Chemical methods of microbial control
VIII. Microbial genetics—DNA studies
A. DNA structure and replication.
B. Protein synthesis
C. Mutations
D. Genetic transfer and recombination
IX. Recombinant DNA and biotechnology
A. Restriction enzymes and principles of electrophoresis
B. Genetically engineered products—medical applications
C. Genetically engineered products—agricultural, animal husbandry
D. Genetically engineered products—food production, vaccines
X. Classification of microorganisms
A. Scientific nomenclature
B. Criteria for classification and identification of microorganisms
XI. Bacterial Groups
A. Gram positive
B. Gram negative
C. Wall-less
D. Unusual walls
E. Spirochetes
F. Rickettsias and Chlamydias
G. Mycoplasmas
H. Actinomycetes
I. Archaeobacteria
XII. Fungi
A. General characteristics
B. Phyla of fungi:
C. Fungal diseases
D. Economic importance of fungi
XIII. Algae
A. General characteristics
B. Discussion of selected algae
C. Lichens
XIV. Slime Molds
A. Cellular slime molds
B. Acellular slime molds
XV. Protozoans
A. General characteristics
B. Medically important protozoans
XVI. Helminths
A. General characteristics
B. Flukes
C. Tapeworms
D. Roundworms
XV. Viruses
A. General characteristics of viruses
B. Viral structure
C. Cultivation methods
D. Viral multiplication
E. DNA viruses
F. RNA viruses
G. Viruses and cancer
H. Latent viral infections
I. Slow viral infections
J. Plant viruses
XVI. Principles of disease and epidemiology
A. Normal flora and fauna
B. Koch’s postulates
C. Pathology, infection, and disease
D. Opportunistic organisms and infections
E. Classifying infectious diseases
F. Spread of infection
G. Transmission of disease
H. Portals of entry and exit
I. Nosocomial infections and control methods
J. Stages in the development of disease
K. Epidemiology, CDC
XVII. Mechanisms of Pathogenicity
A. Portals of entry
B. Factors affecting virulence
C. Damage to host cells
XVIII. Nonspecific Defenses of the Host
A. Mechanical factors
B. Chemical factors
C. Phagocytosis
D. Inflammation reaction
E. Fever
F. Complement system
G. Interferon
XIX. Specific Defenses of the Host
A. Acquired immunity
B. Humoral immune system
C. Cell-mediated immune system
D. Monoclonal antibodies, diagnostic medical kits
XX. Practical Applications of Immunology
A. Vaccines
B. Agglutination reactions
C. Immunofluorescence and fluorescent-antibody techniques
D. Enzyme-linked immunosorbent assay (ELISA)
XXI. Disorders of the Immune System
A. Hypersensitivity (allergies)
B. Cytotoxic (Type II) reactions
C. Autoimmune disorders (Type II reactions)
D. Immune Complex (Type III) (autoimmune) reactions
E. Cell-mediated (Type IV) reactions
F. MHC (major histocompatability complex) "self—non-self"
G. Transplants
XXII. Antimicrobial Drugs
A. Spectrum of activity
B. Action of antimicrobial drugs
C. Antibacteria drugs
D. Antifungal drugs
E. Antiviral drugs
F. Antiprotozoan and antihelminthic drugs
XXIII. Microbial Diseases of human body systems:
A. Diseases of the skin and eyes
B. Diseases of the nervous system
C. Diseases of the cardiovascular system
D. Diseases of the respiratory system
E. Diseases of the digestive system
F. Diseases of the urinary tract and reproductive system
XXIV. Soil and water microbiology
A. Soil organisms
B. Pathogens in the soil
C. Mycorrhizae
D. Water pollution due to microorganisms
E. Water treatment and sewage treatment
XXV. Industrial microbiology
A. Food preservation
B. Role of microorganisms in food production
C. Role of microorganisms in industrial products
D. Microorganisms in the production of pharmaceuticals
XXVI. Introduction to laboratory
A. Safety procedures and equipment
B. Chemical safety
XXVII. Use and care of the microscope
A. Parts and functions of the microscope
B. Proper cleaning of the microscope and lens system
C. Mastery of use of the oil immersion lens
D. Making measurements
XXVIII. Preparation of bacterial smear, and simple staining procedure
A. Making the bacteria smear
B. Staining bacteria using basic stain
C. Viewing stained bacteria under oil immersion lens
XXIX. Differential stains
A. Gram stain
B. Acid-fast stain
XXX. Special stains
A. Negative stain
B. Endospore stain
XXXI. Bacteriological media
A. Enriched media
B. Selective media
C. Differential media
D. Identification media
XXXII Microorganisms in the environment
A. Collection of environmental samples
B. Growth and observation of environmental microorganisms
XXXIII. Dilution techniques
A. Tube dilutions
B. Plate dilutions
XXXIV. Susceptibility testing
A. Antibiotic testing
B. Disinfectant testing
XXXV. Identification of unknown bacteria
A. Microscopic characteristics
B. Cultural characteristics
XXXVI. Observation of prepared slides
A. Fungi slides
B. Algae slides
C. Protozoan slides
D. Helminth slides
XXXVII Microbial Genetics
A. Bacterial Transformation
B. Biotechnology Techniques
Experiments/Activities:
1. Care and Use of the Microscope
2. Bacterial Culturing Techniques
3. Preparing Bacterial Smears and Simple Staining Procedures
4. The Gram Staining Procedure
5. The Acid Fast and Metachromatic Granule Stains
6. The Hanging Drop and Negative Stain
7. Morphological Unknown
8. Isolation of Bacterial Colonies from the Environment
9. Control of Bacteria Through Chemical Disinfection and Ultraviolet Radiation
10. Antibiotic Susceptibility Testing
11. Oxygen Requirements of Bacteria
12. Media for Microbial Isolation
13. Identification of Bacteria by Metabolic Reactions
14. Detection of Bacterial Enzymes
15. The Family Enterobacteriaceae
16. Testing Water for the Presence of Coliforms
17. Food Microbiology
18. General Unknowns